CMEX function

The main processing engine of the MR-HMM is the CMEX function alphbetacompress.c. It can be operated in stand-alone manner separate from the Class-Specific Toolkit. The calling syntax is:
   function [alphas,alognorm,betas,blognorm,gammaN,gamma] =
       alphabetacompress(Lin,S,hparm);

Definition of inputs:

Figure 14.4: Illustration of Likelihood Input matrix Lin for a simple example with just two partitions. Time divisions are one base segment. Entries with ``*" are set to negative infinity. The example is trivial because there is only one valid partition of the data : using segments A and I.
\includegraphics[width=6.0in]{mrhmm_fig.eps}

Definition of outputs:

Baggenstoss 2017-05-19